The detailed information of tRNA gene sequence


Sequence ID>WENV170020466
Genome IDBBPE01008577
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 176
End posion on genome 87
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgattcactt
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTCGATCGGGCCTGTCTCGAAAACAGGAGTAGCAGCAATGTTA
CCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
aagtccagcc
Secondary structure (Cloverleaf model)
>WENV170020466	Ser	CGA
                   t      GCCA aagtccagcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G C G G G     C
    G       +   | |                 T T
    T       T C G G
      C G A        G     AGTAGCAGCAATGTTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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