The detailed information of tRNA gene sequence


Sequence ID>WENV170020468
Genome IDBBPE01008681
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1171
End posion on genome 1094
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
accataatct
tRNA gene sequence 
GGGCACTTAGCTCAGCCTGGAGTGAGCGCTTCGTTGACATCGAAGAGGTCGTGGGTTCAA
ATCCCTCAGTGCCCACAA
Downstream region at tRNA end position 
aagaaattta
Secondary structure (Cloverleaf model)
>WENV170020468	Val	GAC
                   t      ACAA aagaaattta
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     T - A          T A
                    T     C T C C C     A
    C C G A        A      |   | | |     A
  T         C T C G       G T G G G     C
  G         | | | |                 T T
  G         G A G C
    A G T          G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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