The detailed information of tRNA gene sequence


Sequence ID>WENV170020473
Genome IDBBPE01008868
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 656
End posion on genome 563
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
accgaatatc
tRNA gene sequence 
GGTCGGGTGGCAGAGCGGCGAATGCAGCGGTTTGCTAAACCGTAGAGGCCATGGGACATG
GCCTCCCTGGGTTCGAGTCCCAGTCCGACCGCCA
Downstream region at tRNA end position 
tttttggagc
Secondary structure (Cloverleaf model)
>WENV170020473	Ser	GCT
                   c      GCCA tttttggagc
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C
                     G + T          T G
                    T     G A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       C T G G G     C
    G         | | |                 T T
    C       A T G C
      G A          A     AGAGGCCATGGGACATGGCCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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