The detailed information of tRNA gene sequence


Sequence ID>WENV170020488
Genome IDBBPE01009128
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4421
End posion on genome 4336
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctggtcgttt
tRNA gene sequence 
GGAGGAGTGGCCGAGTGGTTTAAGGCGGCGGTCTTGAAAACCGTTGTACGAAAGTACCGT
GGGTTCGAATCCTACCTCCTCCGCCA
Downstream region at tRNA end position 
gcttgctcat
Secondary structure (Cloverleaf model)
>WENV170020488	Ser	TGA
                   t      GCCA gcttgctcat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACGAAAGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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