The detailed information of tRNA gene sequence


Sequence ID>WENV170020489
Genome IDBBPE01009128
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4276
End posion on genome 4182
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgagtactgc
tRNA gene sequence 
GGAGAGATGACCGAGCTGGCCGATGGTGCTCGCCTGCTAAGCGAGTGTAGGGTCAAAAAA
CTCTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tatcgcaatc
Secondary structure (Cloverleaf model)
>WENV170020489	Ser	GCT
                   c      GCCA tatcgcaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C A       G A G G G     C
  G         + | | |                 T T
  C         T G G T
    C G A          G     TGTAGGGTCAAAAAACTCTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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