The detailed information of tRNA gene sequence


Sequence ID>WENV170020492
Genome IDBBPE01009380
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 14454
End posion on genome 14529
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tgttttttta
tRNA gene sequence 
GCGCCCTTAGCTCAATCGGTAGAGCAGCGGACTCTTAATCCGTTGGTTGATGGTTCAATT
CCATCAGGGCGTACCA
Downstream region at tRNA end position 
ttatgtgtga
Secondary structure (Cloverleaf model)
>WENV170020492	Lys	CTT
                   a      ACCA ttatgtgtga
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     C T A C C     A
      T A A        A      | | | | |     A
    C       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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