The detailed information of tRNA gene sequence


Sequence ID>WENV170020496
Genome IDBBPE01009455
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 814
End posion on genome 739
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttagaaatag
tRNA gene sequence 
GCACCCTTAGCTCAGTGGTTAGAGTGTACGGTTCACATCCGTAAGGTCGTAGGTTCGAAC
CCTACAGGGTGCACCA
Downstream region at tRNA end position 
gtaaggaatt
Secondary structure (Cloverleaf model)
>WENV170020496	Val	CAC
                   g      ACCA gtaaggaatt
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     T - A          C A
                    T     C A T C C     A
      T G A        A      | | | | |     G
    G       C T C G       G T A G G     C
    G       | | | +                 T T
    T       G A G T
      T A          G     AGGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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