The detailed information of tRNA gene sequence


Sequence ID>WENV170020501
Genome IDBBPE01009685
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3500
End posion on genome 3588
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cgtttacatt
tRNA gene sequence 
GGATCTTTCGCACTGAGGCCGAGTGCATGAGCCTGTTAAGCTCACGGGATAATTCCCCAT
CGTCGGTTCGAATCCGACAAGATCCGCAA
Downstream region at tRNA end position 
tttcagccca
Secondary structure (Cloverleaf model)
>WENV170020501	Asn	GTT
                   t      GCAA tttcagccca
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     T - A
                     T - A          T A
                    T     C A G C C     A
      A G T        C      | | | | |     G
    G       C A C G       G T C G G     C
    G       | | | |                 T T
    C       G T G C
      C G A        A     CGGGATAATTCCCCATC
                    T - A
                    G - C
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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