The detailed information of tRNA gene sequence


Sequence ID>WENV170020520
Genome IDBBPE01010416
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 34168
End posion on genome 34238
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
attaaattat
tRNA gene sequence 
AGTTAGATAACATAATGGTAATGTGAAAGTCTGCAAAACTTTTAATAATGGTTCGATTCC
ATTTCTAACCTata
Downstream region at tRNA end position 
gacaatttta
Secondary structure (Cloverleaf model)
>WENV170020520	Cys	GCA
                   t      Tata gacaatttta
                     A   C
                     G - C
                     T - A
                     T - A
                     A - T
                     G - C
                     A - T          T T
                    T     T T A C C     A
        A A        A      | | | | |     G
      T     T A C A       A A T G G     C
      G     | | | |                 T T
      G     A T G T
        T A        G     TAAT
                    A - T
                    A - T
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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