The detailed information of tRNA gene sequence


Sequence ID>WENV170020525
Genome IDBBPE01010430
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 446
End posion on genome 375
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttgtcctggc
tRNA gene sequence 
GGGGGCGTAGCTCAGCGGGAGAGCGCCCGCTTTGCAAGCGGGGGGTCGCCGGTTCGAACC
CGGCCGTCTCCAggt
Downstream region at tRNA end position 
gcctcgggtt
Secondary structure (Cloverleaf model)
>WENV170020525	Ala	TGC
                   c      Aggt gcctcgggtt
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     C - G
                     G - C          C A
                    T     C G G C C     A
        G A        A      | | | | |     G
      C     C T C G       G C C G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     GGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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