The detailed information of tRNA gene sequence


Sequence ID>WENV170020526
Genome IDBBPE01010614
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1963
End posion on genome 1886
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gagcaaacgg
tRNA gene sequence 
CGGGCTGTAGCGCAGTTTGGCTAGCGCGCATGCTTGGGGTGCATGAGGCCGCAGGTTCAA
GTCCTGTCAGCCCGACCA
Downstream region at tRNA end position 
gtctttatgt
Secondary structure (Cloverleaf model)
>WENV170020526	Pro	GGG
                   g      ACCA gtctttatgt
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G T C C     A
    T T G A        A      + | | | |     A
  T         C G C G       G C A G G     C
  G         | | | |                 T T
  G         G C G C
    C T A          G     AGGCC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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