The detailed information of tRNA gene sequence


Sequence ID>WENV170020535
Genome IDBBPE01011003
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 332
End posion on genome 258
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aaggccaagt
tRNA gene sequence 
GGGCGGTTAGCTCAGCGGTAGAGCACTACGTTGACATCGTAGTGGCCACTGGTTCGATCC
CAGTACCGCCCACCA
Downstream region at tRNA end position 
ttcgccgcct
Secondary structure (Cloverleaf model)
>WENV170020535	Val	GAC
                   t      ACCA ttcgccgcct
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C T
                    T     T G A C C     A
        G A        A      | | | | |     G
      C     C T C G       A C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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