The detailed information of tRNA gene sequence


Sequence ID>WENV170020545
Genome IDBBPE01011296
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4566
End posion on genome 4474
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttacagttc
tRNA gene sequence 
GGAGAGATGGCCGAGAGGCTGAAGGCAATCGCCTGCTAAGCGATTAAGGGGTGTATAACT
CCTTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gttaggaagt
Secondary structure (Cloverleaf model)
>WENV170020545	Ser	GCT
                   c      GCCA gttaggaagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     TAAGGGGTGTATAACTCCTTC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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