The detailed information of tRNA gene sequence


Sequence ID>WENV170020559
Genome IDBBPE01011617
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 165
End posion on genome 76
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cccctgcgtc
tRNA gene sequence 
GGAGGAGTGGCGGAGTGGTCGATCGCACCGGTCTTGAAAACCGACGCAGGGGGAACCCTG
CCGTGGGTTCGAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
catatcattc
Secondary structure (Cloverleaf model)
>WENV170020559	Ser	TGA
                   c      GCCA catatcattc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C G       G T G G G     C
    G       + | | |                 T T
    T       T C G C
      C G A        A     CGCAGGGGGAACCCTGCC
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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