The detailed information of tRNA gene sequence


Sequence ID>WENV170020593
Genome IDBBPE01013343
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3570
End posion on genome 3646
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gaggttaagt
tRNA gene sequence 
AGGGGTGTAGCTCAGTCTGGAAGAGCGGCGGTCTCCAAAACCGCAGGTCGCGGGTTCGAG
TCCTGCCACCCCTGCCA
Downstream region at tRNA end position 
gtcatgccga
Secondary structure (Cloverleaf model)
>WENV170020593	Trp	CCA
                   t      GCCA gtcatgccga
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | + | |     G
    C       C T C G       G C G G G     C
    T       | | | |                 T T
    G       G A G C
      G A A        G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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