The detailed information of tRNA gene sequence


Sequence ID>WENV170020617
Genome IDBBPE01014805
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 872
End posion on genome 796
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tgggcgagaa
tRNA gene sequence 
GGGTCTGTAGCTCAGTCGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGTTGGTTCGAA
TCCAACCAGACCCACCA
Downstream region at tRNA end position 
atctctcgtt
Secondary structure (Cloverleaf model)
>WENV170020617	Ile	GAT
                   a      ACCA atctctcgtt
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C A A C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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