The detailed information of tRNA gene sequence


Sequence ID>WENV170020631
Genome IDBBPE01015469
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 8797
End posion on genome 8884
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aggtttgttT
tRNA gene sequence 
CATCAGATGGCCGAACTGGTAAGGCACTAGTCTTGAAAACTAGCGTATCCTCTTGGATTG
AGGGTTCGAGTCCCTCTCTGCTCACCC
Downstream region at tRNA end position 
ccacctccta
Secondary structure (Cloverleaf model)
>WENV170020631	Ser	TGA
                   T      ACCC ccacctccta
                     C   C
                     A - T
                     T   C
                     C - G
                     A - T
                     G - C
                     A - T          T G
                    T     C T C C C     A
      C A A        G      | | | | |     G
    T       G C C G       G A G G G     C
    G         | | |                 T T
    G       A G G C
      T A          A     CGTATCCTCTTGGATT
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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