The detailed information of tRNA gene sequence


Sequence ID>WENV170020645
Genome IDBBPE01015964
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 683
End posion on genome 607
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttgttgttt
tRNA gene sequence 
GGCGGCGTAGCTCAGCTGGCTAGAGCAGTCGGTTCATACCCGTCAGGTCGCTGGTTCGAG
TCCAGCCGCCGCCACCA
Downstream region at tRNA end position 
ttcgcgccat
Secondary structure (Cloverleaf model)
>WENV170020645	Met	CAT
                   t      ACCA ttcgcgccat
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGGTC
                    G - C
                    T   T
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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