The detailed information of tRNA gene sequence


Sequence ID>WENV170020649
Genome IDBBPE01016048
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3338
End posion on genome 3429
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ataaatctaa
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTTGAAAGCACTCGCCTCGAAAGCGAGCAGGGAGTTCTAACTC
CCTCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gttagttatc
Secondary structure (Cloverleaf model)
>WENV170020649	Ser	CGA
                   a      GCCA gttagttatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     CAGGGAGTTCTAACTCCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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