The detailed information of tRNA gene sequence


Sequence ID>WENV170020651
Genome IDBBPE01016522
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 540
End posion on genome 467
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcccacacac
tRNA gene sequence 
GGGCCCGTAGCTCAGCGGTTAGAGCAGGGGACTCATAATCCCTTGGTCGCGGGTTCAAAT
CCCTCCGGGCCCACnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170020651	Met	CAT
                   c      ACnn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        A      |   | | |     A
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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