The detailed information of tRNA gene sequence


Sequence ID>WENV170020663
Genome IDBBPE01017127
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 930
End posion on genome 1006
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cattttcatc
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGTCAGAGCGGTCGGCTCATAACCGATTGGTCCTAGGTTCGAG
TCCTAGTGGGCCCACCA
Downstream region at tRNA end position 
atgcaagagg
Secondary structure (Cloverleaf model)
>WENV170020663	Met	CAT
                   c      ACCA atgcaagagg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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