The detailed information of tRNA gene sequence


Sequence ID>WENV170020671
Genome IDBBPE01017549
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 528
End posion on genome 622
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cggcgaccgc
tRNA gene sequence 
GGAGAGTTGGCCGAGTCGGCTGAAGGCGCTCGCCTGCTAAGCGAGTAAGGGGTTATAACG
CCCCTTCGAGGGTTCGAATCCCTCACTCTCCGCCA
Downstream region at tRNA end position 
gttgaaattc
Secondary structure (Cloverleaf model)
>WENV170020671	Ser	GCT
                   c      GCCA gttgaaattc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
    C T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TAAGGGGTTATAACGCCCCTTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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