The detailed information of tRNA gene sequence


Sequence ID>WENV170020676
Genome IDBBPE01017743
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 433
End posion on genome 344
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gagcgcgcac
tRNA gene sequence 
GGACAGTTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGCGGGGAACCGTC
TCGAGGGTTCGAATCCCTCACTGTCCGCCA
Downstream region at tRNA end position 
taacatattg
Secondary structure (Cloverleaf model)
>WENV170020676	Ser	GGA
                   c      GCCA taacatattg
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGGAACCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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