The detailed information of tRNA gene sequence


Sequence ID>WENV170020689
Genome IDBBPE01018588
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 101
End posion on genome 27
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aatttttgat
tRNA gene sequence 
GCGTCTGTAGCTCAACGGTAGAGCACTTGGATGACACCCAAGAGGCCGCAGGTTCGACAC
CTGCTAGACGCACCA
Downstream region at tRNA end position 
tcgacatact
Secondary structure (Cloverleaf model)
>WENV170020689	Val	GAC
                   t      ACCA tcgacatact
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     T - A
                     G + T          A C
                    T     C G T C C     A
        A A        A      | | | | |     G
      C     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  A       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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