The detailed information of tRNA gene sequence


Sequence ID>WENV170020703
Genome IDBBPE01019410
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1477
End posion on genome 1552
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctatgaacgc
tRNA gene sequence 
AGGGGAGTGGCTCAATTGGTAGAGTAGCGGTCTCCAAAACCGTTGGTTGCAGGTTCGAGT
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
atagaaaata
Secondary structure (Cloverleaf model)
>WENV170020703	Trp	CCA
                   c      GCCA atagaaaata
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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