The detailed information of tRNA gene sequence


Sequence ID>WENV170020707
Genome IDBBPE01019628
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1259
End posion on genome 1347
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agcaagtaaC
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTGAAAGCGCCCGCCTCGAAAGCGGGTGAACGGTTACCCGTT
CCGTGAGTTCAAATCTCACTCTCTCCGTnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170020707	Ser	CGA
                   C      GTnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C T C     A
      T G A        G      | | | | |     A
    G       G T C G       G T G A G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TGAACGGTTACCCGTTCC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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