The detailed information of tRNA gene sequence


Sequence ID>WENV170020729
Genome IDBBPE01021468
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2959
End posion on genome 2883
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attgttgtct
tRNA gene sequence 
GGGCCTTTAGCTCAGTTGGTCAGAGCGGCCGGCTCATAACCGGTTGGTCCGGGGTTCGAG
TCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
tacttaatct
Secondary structure (Cloverleaf model)
>WENV170020729	Met	CAT
                   t      ACCA tacttaatct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     TGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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