The detailed information of tRNA gene sequence


Sequence ID>WENV170020739
Genome IDBBPE01021796
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1089
End posion on genome 1013
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtcaatactc
tRNA gene sequence 
GGAGCTGTGGTGTAGAGGCCTAACATGCCTGCCTGTCACGCAGGAGACCGCGGGTTCGAA
TCCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
taatatttag
Secondary structure (Cloverleaf model)
>WENV170020739	Asp	GTC
                   c      GCCA taatatttag
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T G C C C     A
      A G A        G      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    C       A C A T
      C T A        G     AGACC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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