The detailed information of tRNA gene sequence


Sequence ID>WENV170020768
Genome IDBBPE01026065
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 73
End posion on genome 162
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgggacatac
tRNA gene sequence 
GGAGAGATGTCCGAGTGGTTTATGGAGCTGGTCTTGAAAACCAGTGATGCCTTAAGGGCA
CCGGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tgaaggaaat
Secondary structure (Cloverleaf model)
>WENV170020768	Ser	TGA
                   c      GCCA tgaaggaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C T       G G G G G     C
    G       + | | |                 T T
    T       T G G A
      T T A        G     TGATGCCTTAAGGGCACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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