The detailed information of tRNA gene sequence


Sequence ID>WENV170020798
Genome IDBBPE01030624
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 860
End posion on genome 774
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
tgaagaatta
tRNA gene sequence 
GCGCAAGTGGTGGAACGGTATACACGCTGGTTTTAGATGCCAGTGCCCGTAATGGGCTTG
TGGGTTCGAGTCCCACCTTGCGCACCA
Downstream region at tRNA end position 
tgcttgaggg
Secondary structure (Cloverleaf model)
>WENV170020798	Leu	TAG
                   a      ACCA tgcttgaggg
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     A - T
                     G - C          T G
                    T     C A C C C     A
      C A A        G      | | | | |     G
    G       G G T G       G T G G G     C
    G         | | |                 T T
    T       A C A C
      A T          G     TGCCCGTAATGGGCTT
                    C - G
                    T - A
                    G - C
                    G - C
                    T + G
                  T       T
                  T       A
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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