The detailed information of tRNA gene sequence


Sequence ID>WENV170020813
Genome IDBBPE01032915
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1036
End posion on genome 1109
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
caagcacaag
tRNA gene sequence 
GGTTAAGTAACATAACGGTAATGTATATAATTGCAAATTATATAATAGTGGTTCAATTCC
ACTCTTAGCCTCTA
Downstream region at tRNA end position 
tnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170020813	Cys	GCA
                   g      TCTA tnnnnnnnnn
                     G - C
                     G - C
                     T + G
                     T - A
                     A - T
                     A - T
                     G - C          T T
                    T     T C A C C     A
        A A        A      | | | | |     A
      C     T A C A       A G T G G     C
      G     | | | |                 T T
      G     A T G T
        T A        A     TAAT
                    T - A
                    A - T
                    T - A
                    A - T
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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