The detailed information of tRNA gene sequence


Sequence ID>WENV170020816
Genome IDBBPE01033516
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1714
End posion on genome 1803
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ataaagacaa
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTTAAGGCAGCTGCCTGCTAAGCAGTTGTGGGGGCAACCTCA
CCTCGGGTTCGAATCCCGACCTCTCCGCCA
Downstream region at tRNA end position 
tttatcactt
Secondary structure (Cloverleaf model)
>WENV170020816	Ser	GCT
                   a      GCCA tttatcactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     A G C C C     A
      C G A        G      | | | | |     G
    G       G C C G       T C G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     TGTGGGGGCAACCTCACC
                    G + T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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