The detailed information of tRNA gene sequence


Sequence ID>WENV170020851
Genome IDBBPF01000026
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 6039
End posion on genome 6114
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgatatgagg
tRNA gene sequence 
GGCGACGTGGCCAAGTGGTTAAGGCGGGGGTCTGCAAAACCCCTATTCGGCGGTTCGAAT
CCGCCCGTCGCCTCCA
Downstream region at tRNA end position 
ctctatctca
Secondary structure (Cloverleaf model)
>WENV170020851	Cys	GCA
                   g      TCCA ctctatctca
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C C G C C     A
      T G A        G      | | | | |     G
    G       A C C G       G G C G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TATTC
                    G - C
                    G - C
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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