The detailed information of tRNA gene sequence


Sequence ID>WENV170020857
Genome IDBBPF01000035
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1265
End posion on genome 1339
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
taagtgtgat
tRNA gene sequence 
GGGTCCATAGCTCAGTGGCAGAGCGTCCCGTTCACATCGGGAAGGTCATAGGTTCAATCC
CTATTGGGCCCACCA
Downstream region at tRNA end position 
gtaagagatt
Secondary structure (Cloverleaf model)
>WENV170020857	Val	CAC
                   t      ACCA gtaagagatt
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     A - T          C T
                    T     T A T C C     A
        G A        A      | | | | |     A
      T     C T C G       A T A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     AGGTC
                    T - A
                    C - G
                    C - G
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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