The detailed information of tRNA gene sequence


Sequence ID>WENV170020860
Genome IDBBPF01000037
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 9121
End posion on genome 9209
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caggatacat
tRNA gene sequence 
GGAGAGGTGCTGGAGTGGACGATCAGGCGCGCCTGGAGAGCGCGTGTCGCCTTTGGTGAC
CGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gttnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170020860	Ser	GGA
                   t      GCCA gttnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G T C       G T G G G     C
    G       + | | |                 T T
    A       T C A G
      C G A        G     TGTCGCCTTTGGTGACC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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