The detailed information of tRNA gene sequence


Sequence ID>WENV170020922
Genome IDBBPF01000501
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 103
End posion on genome 14
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taataattta
tRNA gene sequence 
GGAGGAGTCGCATAGTGGACTAGTGCACGACACTGGAGATGTCGCAGACCCCAACAGGTC
TCGTGGGTTCAAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
gttgggaaaa
Secondary structure (Cloverleaf model)
>WENV170020922	Ser	GGA
                   a      GCCA gttgggaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    A       G T G C
      C T A        A     CAGACCCCAACAGGTCTC
                    C - G
                    G - C
                    A - T
                    C - G
                    A - T
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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