The detailed information of tRNA gene sequence


Sequence ID>WENV170020935
Genome IDBBPF01000631
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 72123
End posion on genome 72032
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttttgcaccg
tRNA gene sequence 
GGAGAAATGGCAGAGTGGTCGAATGCGGCGGTCTTGAAAACCGTTGTCTTGCTACCGCAG
GACCGGGGGTTCGAATCCCTCTTTCTCCGCAA
Downstream region at tRNA end position 
agtataatca
Secondary structure (Cloverleaf model)
>WENV170020935	Ser	TGA
                   g      GCAA agtataatca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTCTTGCTACCGCAGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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