The detailed information of tRNA gene sequence


Sequence ID>WENV170020938
Genome IDBBPF01000645
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 88
End posion on genome 8
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
taagtaaaaa
tRNA gene sequence 
CGGGATGTGGCCTAGTGGTTTAGGGCGCCGGCATGGGGTGCCGGAAACATTTCGTGGGTT
CGAATCCCGCCATCCCGACCA
Downstream region at tRNA end position 
attcagannn
Secondary structure (Cloverleaf model)
>WENV170020938	Pro	GGG
                   a      ACCA attcagannn
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | + | | |     G
    G       T C C G       G T G G G     C
    G       + | | |                 T T
    T       G G G C
      T T A        G     AAACATTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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