The detailed information of tRNA gene sequence


Sequence ID>WENV170020942
Genome IDBBPF01000700
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4360
End posion on genome 4272
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaacatatac
tRNA gene sequence 
GGAGGGGTATCGAAGTGGTCATAACGGGGCTGACTCGAAATCAGTTTGTCGGAAACGGCA
CGCGGGTTCGAATCCCGCCCCCTCCGCCA
Downstream region at tRNA end position 
ttttnnnnnn
Secondary structure (Cloverleaf model)
>WENV170020942	Ser	CGA
                   c      GCCA ttttnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
    G T G A        A      | | | | |     G
  G         A G C T       G C G G G     C
  T           | | +                 T T
  C         A C G G
    A T A          G     TTGTCGGAAACGGCAC
                    G + T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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