The detailed information of tRNA gene sequence


Sequence ID>WENV170020951
Genome IDBBPF01000744
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 6283
End posion on genome 6360
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
cgaacaaaat
tRNA gene sequence 
GGGCTGTTAGCTCAGTTGGTTTAGAGCATTACCTTGACAGGGTAGGGGTCACTGGTTCGA
ATCCAGTACAGCCCACAA
Downstream region at tRNA end position 
atcacaaaaa
Secondary structure (Cloverleaf model)
>WENV170020951	Val	GAC
                   t      ACAA atcacaaaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     T - A          T A
                    T     T G A C C     A
    T T G A        A      | | | | |     G
  G         C T C G       A C T G G     C
  G         | | | |                 T T
  T         G A G C
    T T A          A     GGGTC
                    T + G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       G
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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