The detailed information of tRNA gene sequence


Sequence ID>WENV170020971
Genome IDBBPF01000885
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 12051
End posion on genome 12126
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
actccagagt
tRNA gene sequence 
GGGGCTGTGGCGCAGTTGGGAGCGCGTCTTGTTCGCAACGAGAAGGCCAGGGGTTCGAAT
CCCCTCAGCTCCACCA
Downstream region at tRNA end position 
annnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170020971	Ala	CGC
                   t      ACCA annnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
      T G A        G      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGCC
                    T - A
                    C - G
                    T - A
                    T + G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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