The detailed information of tRNA gene sequence


Sequence ID>WENV170021016
Genome IDBBPF01001356
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 721
End posion on genome 799
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
accaataaat
tRNA gene sequence 
GCGGGCGTAGAGGAGTCTGGTCGTCCTCGGCTCCCTGTCACGGAGCAAATCGCCGGTTCA
AATCCGGTCGCCCGCGCAA
Downstream region at tRNA end position 
aaatcccgct
Secondary structure (Cloverleaf model)
>WENV170021016	Asp	GTC
                   t      GCAA aaatcccgct
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G G C C     A
    C T G A        A      + | | | |     A
  T         G G A G       G C C G G     C
  G         | | | |                 T T
  G         C C T C
    T C G T        G     AAATC
                    G - C
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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