The detailed information of tRNA gene sequence


Sequence ID>WENV170021040
Genome IDBBPF01001710
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 14139
End posion on genome 14227
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tctgtgctgc
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTGATGGCGCTAGTCTTGAAAACTAGTGATCCTGCAAGGGAC
CGGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cacaagtagt
Secondary structure (Cloverleaf model)
>WENV170021040	Ser	TGA
                   c      GCCA cacaagtagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G       + | | |                 T T
    T       T G G C
      T G A        G     TGATCCTGCAAGGGACC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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