The detailed information of tRNA gene sequence


Sequence ID>WENV170021094
Genome IDBBPF01002337
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 9403
End posion on genome 9492
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgaatataga
tRNA gene sequence 
GGAGGGTTGGCAGAGCGGTCTAATGCGCCGCACTCGAAATGCGGTTGGGGAGAAATCCCC
TCACAGGTTCAAATCCTGTACCCTCCGCCA
Downstream region at tRNA end position 
aaattgaaaa
Secondary structure (Cloverleaf model)
>WENV170021094	Ser	CGA
                   a      GCCA aaattgaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T G T C C     A
      C G A        G      | | | | |     A
    G       G A C G       A C A G G     C
    G         | | |                 T T
    T       A T G C
      C T A        G     TTGGGGAGAAATCCCCTC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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