The detailed information of tRNA gene sequence


Sequence ID>WENV170021115
Genome IDBBPF01002765
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1
End posion on genome 74
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGCCCCGTGGTGTAGCGGACTAACATGCCACCCTGTCACGGTGGAGATCAGGGGTTCGAA
TCCCCTCGGGGTCGgat
Downstream region at tRNA end position 
gtgcaatacg
Secondary structure (Cloverleaf model)
>WENV170021115	Asp	GTC
                   n      Ggat gtgcaatacg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       T G T G       A G G G G     C
    G       | | | +                 T T
    A       A C A T
      C T A        G     AGATC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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