The detailed information of tRNA gene sequence


Sequence ID>WENV170021131
Genome IDBBPF01003106
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 14752
End posion on genome 14838
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttcaatttta
tRNA gene sequence 
GGCGGGATGCTGGAGTGGTTTATCAGGCCTGTCTCGAAAACAGGTGTACCTTAAAGGGTA
CCGTAGGTTCAAATCCTACTCCCGCCGtta
Downstream region at tRNA end position 
ggaagtttgc
Secondary structure (Cloverleaf model)
>WENV170021131	Ser	CGA
                   a      Gtta ggaagtttgc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    G       G G T C       G T A G G     C
    G       + | | |                 T T
    T       T C A G
      T T A        G     TGTACCTTAAAGGGTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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