The detailed information of tRNA gene sequence


Sequence ID>WENV170021139
Genome IDBBPF01003260
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4191
End posion on genome 4114
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ttgtcttctt
tRNA gene sequence 
GCGCCCGTAGCTCAGTCTGGATAGAGCGGTGGCCTCCGGAGCCAGAGGTCGGAGGTTCAA
ATCCTCCCGGGCGTGCTA
Downstream region at tRNA end position 
catattttac
Secondary structure (Cloverleaf model)
>WENV170021139	Arg	CCG
                   t      GCTA catattttac
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C T C C     A
    C T G A        A      | | | | |     A
  T         C T C G       G G A G G     C
  G         | | | |                 T T
  G         G A G C
    A T A          G     AGGTC
                    G   G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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