The detailed information of tRNA gene sequence


Sequence ID>WENV170021223
Genome IDBBPF01004193
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 189
End posion on genome 104
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aaaattatgt
tRNA gene sequence 
GGAGGGGTACCCAAGTGGCTAAAGGGGGCAGACTGTAAATCTGCTGGCTGACGTCTTCGT
TGGTTCGAATCCGACCCCCTCCACCA
Downstream region at tRNA end position 
attatttgta
Secondary structure (Cloverleaf model)
>WENV170021223	Tyr	GTA
                   t      ACCA attatttgta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A G C C     A
      T G A        A      | | + | |     G
    G       A C C C       G T T G G     C
    G         | | |                 T T
    C       A G G G
      T A A        G     TGGCTGACGTCTTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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