The detailed information of tRNA gene sequence


Sequence ID>WENV170021234
Genome IDBBPF01004426
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 6066
End posion on genome 5991
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCCGACGTAGCTCAATTGGTAGAGCAGCTGAATCGTAATCAGCAGGTTGCGGGTTCGAGT
CCCATTGTCGGCTCCA
Downstream region at tRNA end position 
attaaaaatc
Secondary structure (Cloverleaf model)
>WENV170021234	Thr	CGT
                   n      TCCA attaaaaatc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     G + T          T G
                    T     T A C C C     A
      T A A        A      +   | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  A       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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