The detailed information of tRNA gene sequence


Sequence ID>WENV170021240
Genome IDBBPF01004462
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 6
End posion on genome 80
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
nnnnnttttt
tRNA gene sequence 
GGCCCCATCGTCTAGCGGTTAGGACTCCAGATTCTCAATCTGGCAACACGGGTTCGATTC
CCGTTGGGGTCACCA
Downstream region at tRNA end position 
aacaggaaat
Secondary structure (Cloverleaf model)
>WENV170021240	Glu	CTC
                   t      ACCA aacaggaaat
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          T     CAAC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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